Changes in microbial diversity and population structure occur as a result of increased nutrient loads and knowledge of microbial community composition may be a useful tool for assessing water quality in coastal ecosystems. However, the ability to understand how microbial communities and individual species respond to increased nutrient loads is limited by the paucity of community-level microbial data. The microbial community composition in the water column and sediments was measured across tropical tidal creeks and the relationship with increased nutrient loads assessed by comparing sewage-impacted and non-impacted sites. Diversity-function relationships were examined with a focus on denitrification and the presence of pathogens typically associated with sewage effluent tested. Significant relationships were found between the microbial community composition and nutrient loads. Species richness, diversity and evenness in the water column all increased in response to increased nutrient loads, but there was no clear pattern in microbial community diversity in the sediments. Water column bacteria also reflected lower levels of denitrification at the sewage-impacted sites. The genetic diversity of pathogens indicated that more analysis would be required to verify their status as pathogens, and to develop tests for monitoring. This study highlights how microbial communities respond to sewage nutrients in a tropical estuary. Estuarine, Coastal and Shelf Science

This report provides background information about the Ginninderra controlled release Experiment 2 including a description of the environmental and weather conditions during the experiment, the groundwater levels and a brief description of all the monitoring techniques that were trialled during the experiment. Release of CO2 began 26 October 2012 at 2:25 PM and stopped 21 December 2012 at 1:30 PM. The total CO2 release rate during Experiment 2 was 218 kg/d CO2. The aim of the second Ginninderra controlled release was to artificially simulate the leakage of CO2 along a line source, to represent leakage along a fault. Multiple methods and techniques were then trialled in order to assess their abilities to: - detect that a leak was present - pinpoint the location of the leak - identify the strength of the leak - monitor how the CO2 behaves in the sub-surface - assess the effects it may have on plant health Several monitoring and assessment techniques were trialled for their effectiveness to quantify and qualify the CO2 that was release. This experiment had a focus on plant health indicators to assess the aims listed above, in order to evaluate the effectiveness of monitoring plant health and the use of geophysical methods to identify that a CO2 leak may be present. The methods are described in this report and include: - soil gas - airborne hyperspectral surveys - plant health (PhenoMobile) - soil CO2 flux - electromagnetic (EM-31) - electromagnetic (EM-38) - ground penetrating radar (GPR) This report is a reference guide to describe the Ginninderra Experiment 2 details. Only methods are described in this report with the results of the study published in conference papers and future journal articles.

In many areas of the world, vegetation dynamics in semi-arid floodplain environments have been seriously impacted by increased river regulation and groundwater use. With increases in regulation along many rivers in the Murray-Darling Basin, flood volume, seasonality and frequency have changed which has in turn affected the condition and distribution of vegetation. Floodplain vegetation can be degraded from both too much and too little water due to regulation. Over-regulation and increased use of groundwater in these landscapes can exacerbate the effects related to natural climate variability. Prolonged flooding of woody plants has been found to induce a number of physiological disturbances such as early stomatal closure and inhibition of photosynthesis. However, drought conditions can also result in leaf biomass reduction and sapwood area decline. Depending on the species, different inundation and drought tolerances are observed. Identification of groundwater-dependent terrestrial vegetation, and assessment of the relative importance of different water sources to vegetation dynamics, typically requires detailed ecophysiological studies over a number of seasons or years as shown in Chowilla, New South Wales [] and Swan Coastal Plain, Western Australia []. However, even when groundwater dependence can be quantified, results are often difficult to upscale beyond the plot scale. Quicker, more regional approaches to mapping groundwater-dependent vegetation have consequently evolved with technological advancements in remote sensing techniques. Such an approach was used in this study. LiDAR canopy digital elevation model (CDEM) and foliage projected cover (FPC) data were combined with Landsat imagery in order to characterise the spatial and temporal behaviour of woody vegetation in the Lower Darling Floodplain, New South Wales. The multi-temporal dynamics of the woody vegetation were then compared to the estimated availability of different water sources in order to better understand water requirements.

Wildfires are one of the major natural hazards facing the Australian continent. Chen (2004) rated wildfires as the third largest cause of building damage in Australia during the 20th Century. Most of this damage was due to a few extreme wildfire events. For a vast country like Australia with its sparse network of weather observation sites and short temporal length of records, it is important to employ a range of modelling techniques that involve both observed and modelled data in order to produce fire hazard and risk information/products with utility. This presentation details the use of statistical and deterministic modelling of both observations and synthetic climate model output (downscaled gridded reanalysis information) in the development of extreme fire weather potential maps. Fire danger indices such as the McArthur Fire Forest Danger Index (FFDI) are widely used by fire management agencies to assess fire weather conditions and issue public warnings. FFDI is regularly calculated at weather stations using measurements of weather variables and fuel information. As it has been shown that relatively few extreme events cause most of the impacts, the ability to derive the spatial distribution of the return period of extreme FFDI values contributes important information to the understanding of how potential risk is distributed across the continent. The long-term spatial tendency FFDI has been assessed by calculating the return period of its extreme values from point-based observational data. The frequency and intensity as well as the spatial distribution of FFDI extremes were obtained by applying an advanced spatial interpolation algorithm to the recording stations' measurements. As an illustration maps of 50 and 100-year return-period (RP) of FFDI under current climate conditions are presented (based on both observations and reanalysis climate model output). MODSIM 2013 Conference

Imagine you are an incident controller viewing a computer screen which depicts the likely spread of a bushfire that's just started. The display shows houses and other structures in the fire's path, and even the demographics of the people living in the area, such as the number of people, their age spread, whether households have independent transport, and whether English is their second language. In addition, imagine that you can quantify and display the uncertainty in both the fire weather and also the type and state of the vegetation, visualising the sensitivity of the expected fire spread and impact to these uncertainties. It will be possible to consider 'what if' scenarios as the event unfolds, and reject those scenarios that are no longer plausible. The advantages of such a simulation system in making speedy, well-informed decisions has been considered by a group of Bushfire CRC researchers who have collaborated to produce a 'proof of concept' for such a system, demonstrated initially on three case studies. The 'proof of concept' system has the working name FireDST (Fire Impact and Risk Evaluation Decision Support Tool). FireDST links various databases and models, including the Phoenix RapidFire fire prediction model and building vulnerability assessment models, as well as infrastructure and demographic databases. The information is assembled into an integrated simulation framework through a geographical information system (GIS) interface. Pre-processed information, such as factors that determine the local and regional wind, and also the typical response of buildings to fire, are linked through a database, along with census-derived social and economic information. This presentation provides an overview of the FireDST simulation 'proof of concept' tool and walks through a sample probabilistic simulation constructed using the tool. Handbook MODSIM2013 Conference

Here we report on the results of a study undertaken in the Flinders Commonwealth Marine Reserve (southeast Australia) designed to test the benefits of two approaches to characterising shelf habitats: (i) MBES mapping of a continuous (~30 km2) area selected on the basis of its potential to include a range of representative seabed habitats , versus; (ii) a novel approach that uses targeted mapping of a greater number of smaller, but spatially balanced, locations using a Generalized Random Tessellation Stratified sample design. We present the first quantitative estimates of habitat type on the shelf of the Flinders reserve, using both survey approaches, based on three MBES analysis techniques. We contrast the quality of information that both survey approaches offer in combination with the three MBES analysis methods. We then consider the implications for future inventory of benthic habitats in shelf environments in the context of monitoring extensive offshore marine reserves.

CO2CRC Symposium 2013: Oral presentation as part of a tag-team Ginninderra presentation As part of the controlled release experiments at the Ginninderra test site, a total of 14 soil flux surveys were conducted; 12 during the first experiment (March 2012 - June 2012), and 2 during the second experiment (October - December 2012). The aim was to determine what proportion of the known CO2 that was released could be measured using the soil flux method as a quantification tool. The results of this study enabled us to use the soil flux measurements as a proxy for other CO2 quantification methods and to gain an understanding of how the CO2 migrated within the sub-surface. For experiment one; baseline surveys were conducted pre-release, followed by surveys several times a week during the first stages of the release. The CO2 'breakthrough' was detected only 1 day after the release began. Surveys were then conducted weekly to monitor the flux rate over time. The soil CO2 flux gradually increased in magnitude until almost reaching the expected release rate (128 kg/day measured while the release rate was 144 kg/day) after approximately 4 weeks, and then receded quickly once the controlled release was stopped. Soil gas wells confirm that there is significant lateral migration of the CO2 in the sub-surface, suggesting that there was a degree of accumulation of CO2 in the sub-surface during the experiment.

Poster for IAH 2013 A major concern for regulators and the public with geological storage of CO2 is the potential for the migration of CO2 via a leaky fault or well into potable groundwater supplies. Given sufficient CO2, an immediate effect on groundwater would be a decrease in pH which could lead to accelerated weathering, an increase in alkalinity and the release of major and minor ions. Laboratory and core studies have demonstrated that on contact with CO2 heavy metals can be released under low pH and high CO2 conditions (particularly Pd, Ni and Cr). There is also a concern that trace organic contaminants could be mobilised due to the high solubility of many organics in supercritical CO2. These scenarios potentially occur in a high CO2 leakage event, therefore detection of a small leak although barely perceptible could provide an important early warning for a subsequent and more substantial impact.

A video for the launch of new Great Barrier Reef bathymetry data on 30 November 2017.

A postcard providing an overview of the marine ecology programme at Geoscience Australia