This dataset contains the sea surface temperature data derived from the MODIS Terra sensor, the chlorophyll data derived from the SeaWIFS satellite, and the K490 data derived from the SeaWIFS satellite. Ocean temperature is a useful indicator of the type of marine life that could be found at a particular location. Many marine plants and organisms have a relatively narrow range of tolerance for temperature, and will either perish or be out-competed where temperatures are outside their comfort zone. Chlorophyll a is a plant pigment which provides a measurement of the biomass (or quantity) of plants. In the water column, it is a measure of the suspended (or planktonic) biomass of single-celled microscopic plants. Chlorophyll is a commonly used measure of water quality. K490 indicates the turbidity of the water column; the depth to which the visible light in the blue-green region of the spectrum penetrates the water column. It is directly related to the presence of particles in the water column. Turbidity has consequences for benthic marine life, ranging from the availability of light to the quantity of nutrients in the water column. The datasets contain 6 grids. Two for each variable: mean and standard deviation. Please see the metadata for detailed information.

The Carnarvon shelf at Point Cloates, Western Australia, is characterised by a series of prominent ridges and hundreds of mounds that provide hardground habitat for coral and sponge gardens. The largest ridge is 20 m high, extends 15 km alongshore in 60 m water depth and is interpreted as a drowned fringing reef. To landward, smaller ridges up to 1.5 km long and 16 m high are aligned to the north-northeast and are interpreted as relict aeolian dunes. Mounds are less than 5 m high and may also have a sub-aerial origin. In contrast, the surrounding seafloor is sandy with relatively low densities of epibenthic organisms. The dune ridges are estimated to be Late Pleistocene in age and their preservation is attributed to cementation of calcareous sands to form aeolianite, prior to the postglacial marine transgression. On the outer shelf, sponges grow on isolated low profile ridges at ~85 m and 105 m depth and are also interpreted as partially preserved relict shorelines.

The characterisation of benthic habitats based on their abiotic (physical and chemical) attributes remains poorly defined in the marine environment, but is becoming increasingly central in the development of marine management plans in Australia and elsewhere in the world. The current study tested this link between physical and biological datasets for the southern Gulf of Carpentaria, Australia. The results presented were based on a range of physical factors, including the sediment composition (grain size and carbonate content), sediment mobility, water depth and organic carbon flux, and their relationship to the distribution and diversity of benthic macrofauna was tested. The results reveal the importance of process-based indices, such as sediment mobility, in addition to other environmental factors in defining the distribution of the benthic macrofauna. The distribution of the benthic macrofauna changes gradationally across the south-eastern Gulf, associated with changes in the per cent mud and gravel, the seabed exposure and the water depth. Patterns of diversity also reveal the importance of physical processes such as sediment mobility in defining benthic habitats. The species' environment relationships observed at the small scale of the current study are consistent with broader associations observed for other organisms within the Gulf.

Demands are being made of the marine environment that threaten to erode the natural, social and economic benefits that human society derives from the oceans. Expanding populations ensure a continuing increase in the variety and complexity of marine based activities - fishing, power generation, tourism, mineral extraction, shipping etc. The two most commonly acknowledged purposes for habitat mapping in the case studies contained in this book are to support government spatial marine planning, management and decision-making and to support and underpin the design of marine protected areas (MPAs; see Ch. 64).

The Oceanic Shoals Commonwealth Marine Reserve (CMR) (>71,000 km2) is located in the Timor Sea and is part of the National Representative System of Marine Protected Areas of Australia. The Reserve incorporates extensive areas of carbonate banks and terraces that are recognised in the North and North West Marine Region Management Plans as Key Ecological Features (KEFs). Although poorly studied, these features have been identified as potential biodiversity hotspots for the Australian tropical north. As part of the National Environment Research Program (NERP), Geoscience Australia (GA) in collaboration with the Australian Institute of Marine Sciences (AIMS) undertook a marine biodiversity survey in 2012 to improve the knowledge of this area and better understand the importance of these KEFs. Amongst the many activities undertaken, continuous high-resolution multibeam mapping, video and still camera observations, and physical seabed sampling of four areas covering 510 km2 within the western side of the CMR was completed. Multibeam imagery reveals a high geomorphic diversity in the Oceanic Shoals CMR, with numerous banks and terraces, elevated 30 to 65 m above the generally flat seabed (~105 m water depth), that provide hard substrate for benthic communities. The surrounding plains are characterised by fields of depressions (pockmarks) formed in soft silty sediments that are generally barren of any epibenthos. A distinctive feature of many pockmarks is a linear scour mark that extends several tens of metres (up to 150 m) from pockmark depressions. Previous numerical and flume tank simulations have shown that scouring of pockmarks occurs in the direction of the dominant near-seabed flow. These geomorphic features may therefore serve as a proxy for local-scale bottom currents, which may in turn inform on sediment processes operating in these areas and contribute to the understanding of the distribution of biodiversity. This study focused on characterising these seabed scoured depressions and investigating their potential as an environmental proxy for habitat studies. The study used ArcGIS spatial analyst tools to quantify the features and explored their potential relationships with other variables (e.g. multibeam backscatter, regional modelled bottom stress, biological abundance and presence/absence) to provide insight into their development, and contribute to a better understanding of the environment surrounding carbonate banks. Preliminary results show a relationship between pockmark types, i.e. with or without scour mark, and backscatter strength. This relationship suggests some additional shallow sub-surface control, mainly related to the presence of buried carbonate bank. In addition, the results suggest that tidal flows are redirected by the banks, leading to locally varied flow directions and 'shadowing' in the lee of the larger banks. This in turn is likely to have an influence on the observed density and abundance of benthic assemblages.

Geoscience Australia carried out marine surveys in Jervis Bay (NSW) in 2007, 2008 and 2009 (GA303, GA305, GA309, GA312) to map seabed bathymetry and characterise benthic environments through colocated sampling of surface sediments (for textural and biogeochemical analysis) and infauna, observation of benthic habitats using underwater towed video and stills photography, and measurement of ocean tides and wavegenerated currents. Data and samples were acquired using the Defence Science and Technology Organisation (DSTO) Research Vessel Kimbla. Bathymetric mapping, sampling and tide/wave measurement were concentrated in a 3x5 km survey grid (named Darling Road Grid, DRG) within the southern part of the Jervis Bay, incorporating the bay entrance. Additional sampling and stills photography plus bathymetric mapping along transits was undertaken at representative habitat types outside the DRG. This 126 sample dataset comprises chlorophyll a and pheophytin a measurements on surface seabed sediments (~0 to 2 cm) from Jervis Bay.

Geoscience Australia carried out marine surveys in Jervis Bay (NSW) in 2007, 2008 and 2009 (GA303, GA305, GA309, GA312) to map seabed bathymetry and characterise benthic environments through colocated sampling of surface sediments (for textural and biogeochemical analysis) and infauna, observation of benthic habitats using underwater towed video and stills photography, and measurement of ocean tides and wavegenerated currents. Data and samples were acquired using the Defence Science and Technology Organisation (DSTO) Research Vessel Kimbla. Bathymetric mapping, sampling and tide/wave measurement were concentrated in a 3x5 km survey grid (named Darling Road Grid, DRG) within the southern part of the Jervis Bay, incorporating the bay entrance. Additional sampling and stills photography plus bathymetric mapping along transits was undertaken at representative habitat types outside the DRG. This 50 sample data set comprises %TOC, %TN, TOC/TN ratios, and carbon and nitrogen isotopic ratios for surface (0.0 to 2.0 cm) sediments from Jervis Bay.

Geoscience Australia carried out marine surveys in Jervis Bay (NSW) in 2007, 2008 and 2009 (GA303, GA305, GA309, GA312) to map seabed bathymetry and characterise benthic environments through colocated sampling of surface sediments (for textural and biogeochemical analysis) and infauna, observation of benthic habitats using underwater towed video and stills photography, and measurement of ocean tides and wavegenerated currents. Data and samples were acquired using the Defence Science and Technology Organisation (DSTO) Research Vessel Kimbla. Bathymetric mapping, sampling and tide/wave measurement were concentrated in a 3x5 km survey grid (named Darling Road Grid, DRG) within the southern part of the Jervis Bay, incorporating the bay entrance. Additional sampling and stills photography plus bathymetric mapping along transits was undertaken at representative habitat types outside the DRG. This 81 sample dataset comprises acidextractable concentrations of trace elements (Fe, Mn, Co, Ni, Cu, Zn, Ge, As, Cd and Pb) in surface seabed sediments (~0 to 2 cm) from Jervis Bay.

Geoscience Australia carried out marine surveys in Jervis Bay (NSW) in 2007, 2008 and 2009 (GA303, GA305, GA309, GA312) to map seabed bathymetry and characterise benthic environments through co-located sampling of surface sediments (for textural and biogeochemical analysis) and infauna, observation of benthic habitats using underwater towed video and stills photography, and measurement of ocean tides and wave-generated currents. Data and samples were acquired using the Defence Science and Technology Organisation (DSTO) Research Vessel Kimbla. Bathymetric mapping, sampling and tide/wave measurement were concentrated in a 3x5 km survey grid (named Darling Road Grid, DRG) within the southern part of the Jervis Bay, incorporating the bay entrance. Additional sampling and stills photography plus bathymetric mapping along transits was undertaken at representative habitat types outside the DRG. This 110 sample data-set comprises salinity, dissolved oxygen, water temperature and light attenuation (KD) measurements from Jervis Bay.

Geoscience Australia carried out marine surveys in Jervis Bay (NSW) in 2007, 2008 and 2009 (GA303, GA305, GA309, GA312) to map seabed bathymetry and characterise benthic environments through colocated sampling of surface sediments (for textural and biogeochemical analysis) and infauna, observation of benthic habitats using underwater towed video and stills photography, and measurement of ocean tides and wavegenerated currents. Data and samples were acquired using the Defence Science and Technology Organisation (DSTO) Research Vessel Kimbla. Bathymetric mapping, sampling and tide/wave measurement were concentrated in a 3x5 km survey grid (named Darling Road Grid, DRG) within the southern part of the Jervis Bay, incorporating the bay entrance. Additional sampling and stills photography plus bathymetric mapping along transits was undertaken at representative habitat types outside the DRG. This 18 sample data set comprises %TOC, %TN, TOC/TN ratios, carbon and nitrogen isotopic ratios and major and trace element concnetrations of plant and algae tissues from Jervis Bay. The red algae likely belong to the genera Gracilaria edulis and Acrosorium venulosum which are abundant in the Bay, and are often observed to washup on the beaches.