Geoscience Australia marine reconnaissance survey TAN0713 to the Lord Howe Rise offshore eastern Australia was completed as part of the Federal Government¿s Offshore Energy Security Program between 7 October and 22 November 2007 using the New Zealand Government¿s research vessel Tangaroa. The survey was designed to sample key, deep-sea environments on the east Australian margin (a relatively poorly-studied shelf region in terms of sedimentology and benthic habitats) to better define the Capel and Faust basins, which are two major sedimentary basins beneath the Lord Howe Rise. Samples recovered on the survey contribute to a better understanding of the geology of the basins and assist with an appraisal of their petroleum potential. They also add to the inventory of baseline data on deep-sea sediments in Australia. The principal scientific objectives of the survey were to: (1) characterise the physical properties of the seabed associated with the Capel and Faust basins and Gifford Guyot; (2) investigate the geological history of the Capel and Faust basins from a geophysical and geological perspective; and (3) characterise the abiotic and biotic relationships on an offshore submerged plateau, a seamount, and locations where fluid escape features were evident. This dataset comprises total oxygen uptake and total carbon fluxes from core incubation experiments. Some relevant publications which pertain to these datasets include: 1. Heap, A.D., Hughes, M., Anderson, T., Nichol, S., Hashimoto, T., Daniell, J., Przeslawski, R., Payne, D., Radke, L., and Shipboard Party, (2009). Seabed Environments and Subsurface Geology of the Capel and Faust basins and Gifford Guyot, Eastern Australia ¿ post survey report. Geoscience Australia, Record 2009/22, 166pp. 2. Radke, L.C. Heap, A.D., Douglas, G., Nichol, S., Trafford, J., Li, J., and Przeslawski, R. 2011. A geochemical characterization of deep-sea floor sediments of the northern Lord Howe Rise. Deep Sea Research II 58: 909-921

Submarine canyons are recognised as having an influence on oceanographic processes, sediment transport, productivity and benthic biodiversity from the shelf to the slope. However, not all canyons are the same and the relative importance of an individual canyon will, in part, be determined by its form, shape and position on the continental margin. Here we present an analysis of these parameters using an updated national dataset of 713 submarine canyons for the margin of mainland Australia. Attribute data for each canyon is used to classify them into canyon types across a hierarchy of canyon physical characteristics for shelf-incised and slope-confined (blind) canyons. At each level on the hierarchy, large groupings of canyons are identified that represent common sets of characteristics. The spatial distribution of canyons on the Australian margin is not regular, with clusters located in the east, southeast, west and southwest. The northern margin has the lowest concentration of canyons. We also assess the potential productivity associated with the various canyon types using chlorophyll-a data derived from satellite (MODIS) images. Shelf-incised canyons are associated with significantly higher and more temporally variable chlorophyll-a concentrations, consistent with their function as conduits for upwelling. Australian submarine canyons are well represented in the national network of marine protected areas, with 36 percent of the mapped canyon population intersecting (whole or in part) a Commonwealth Marine Reserve. This information is relevant to setting priorities for the management of these reserves. Results from this study provide a framework for further analysis of the relative importance of canyons on the Australian margin.

The Leeuwin Current has significant ecological impact on the coastal and marine ecosystem of south-western Australia. This study investigated the spatial and temporal dynamics of the Leeuwin Current using monthly MODIS SST dataset between July 2002 and December 2012. Topographic Position Index layers were derived from the SST data for the mapping of the spatial structure of the Leeuwin Current. The semi-automatic classification process involves segmentation, 'seeds' growing and manual editing. The mapping results enabled us to quantitatively examine the current's spatial and temporal dynamics in structure, strength, cross-shelf movement and chlorophyll a characteristic. It was found that the Leeuwin Current exhibits complex spatial structure, with a number of meanders, offshoots and eddies developed from the current core along its flowing path. The Leeuwin Current has a clear seasonal cycle. During austral winter, the current locates closer to the coast (near shelf break), becomes stronger in strength and has higher chlorophyll a concentrations. While, during austral summer, the current moves offshore, reduces its strength and chlorophyll a concentrations. The Leeuwin Current also has notable inter-annual variation due to ENSO events. In El Niño years the current is likely to reduce strength, move further inshore and increase its chlorophyll a concentrations. The opposite occurs during the La Niña years. In addition, this study also demonstrated that the Leeuwin Current has a significantly positive influence over the regional nutrient characteristics during the winter and autumn seasons. Apart from surface cooling and advection, the Leeuwin Current's sizable cross-shelf movement may be another contributing factor to the seasonal and inter-annual variations of its chlorophyll a concentrations.

Fisheries groups worldwide are concerned that seismic operations negatively affect catch rates within a given area, although there is a lack of field-based scientific evidence. In southeast Australia, marine seismic surveys have been blamed for mass mortalities of benthic invertebrates including the commercial scallop Pecten fumatus. Geoscience Australia conducted a 2-D seismic survey in this region in April 2015, thereby presenting an opportunity to conduct field-based experiments investigating the potential impacts on marine organisms. Moored hydrophones recorded noise before and during the seismic survey. An Autonomous Underwater Vehicle (AUV) was used to evaluate the effectiveness of seafloor images to support scallop monitoring. In addition, more traditional sampling was undertaken using a commercial scallop dredge from which a variety of biological and biochemical variables were analysed. The AUVs and dredge were deployed at three time periods (before the seismic survey, 2 months after seismic operations ceased, 10 months after seismic operations ceased), although poor-quality AUV images acquired before the survey precluded the analysis of these data. The highest sound exposure level recorded by the hydrophones was 146 dB re 1 µPa2s at 51 m water depth, at a distance of 1.4 km from the airguns. Commercial scallops were not abundant in the study area, and analysis of AUV images revealed no differences in commercial scallop types (live, clapper, dead shell, other) between experimental and control zones. Similarly, analysis of dredged scallops shows no detectable impact due to seismic activity on shell size, meat size and condition, gonad size and condition, and biochemical indices. Both AUV and dredging data showed strong spatial patterns, with significant differences between sites. Our study confirms previous work showing no evidence of immediate mortality on scallops in the field, and it expands this to include no evidence of long-term or sub-lethal effects. Negative impacts are currently confined to laboratory settings with unrealistic sound exposures. If short-term effects are investigated, we recommend a focus on the underlying mechanisms of potential impacts (i.e. physiological responses), rather than gross metrics such as mortality or size. Physiological responses to airgun sound may not be as immediately obvious as mortality or behavioural responses, but they are equally important to provide early indications of negative effects, as well as to explain the underlying mechanisms behind mortality events and reduced catch.

Bathymetric flythrough of the Southeast Margin of Australia for a Powerpoint presentation on the Marine Geoscience capabilities of the RV Investigator. The presentation will be given at the Welcome to Port Ceremony for the ship.

The shallow-water (<160m) marine environment around the Australian research station, Casey station (east Antarctica) is a high use area, frequently visited by both large resupply vessels and smaller workboats conducting scientific research in the area, yet high resolution modern bathymetric data in the area, as well as much of the east Antarctic continental margin, is limited. The Casey area hosts significant levels of biodiversity, but this knowledge is geographically restricted in scope (i.e. shallow depths, close to shore). This biodiversity faces pressures from human activities and effects of climate change, yet extensive knowledge gaps remain, limiting efforts to conserve and manage it effectively. Improved bathymetric surveying in this region will begin to fill these knowledge gaps by conducting representative sampling of both the physical environment and biological communities and reduce the risk to maritime operations in the region. During the period December 2014 to February 2015, a collaborative multibeam survey (Australian Antarctic Division, Royal Australian Navy and Geoscience Australia) was conducted in the shallow-water near-shore regions adjacent to Casey station and covered an area of ca. 28 km2. The survey employed Geoscience Australia's KONGSBERG EM3002 dual head sonar system mounted on an Australian Antarctic Division supplied science workboat, the RV Howard Burton. In total, the surveyed region covered ca. 34 km2, to a maximum depth of ca. 170m. The data was processed in CARIS v8 and a seafloor surface has been gridded at a resolution of 1m. Preliminary field-based interpretation of the submarine geomorphology reveal several dominant geomorphological features which can be simplified into 4 domains as follows: (1) NW and WSW trending fault and channel systems, (2) glacio-fluvial seafloor features (possible terminal moraines) within channel features, (3) bedrock basement highs and (4) `deep isolated basins.

Geoscience Australia marine reconnaissance survey GA2476 to the west Australian continental margin was undertaken as part of the Australian Government's Offshore Energy Program between 25 October 2008 and 19 January 2009 using the German research vessel RV Sonne. The survey acquired geological, geophysical, oceanographic and biological data over poorly known areas of Australia's western continental margin in order to improve knowledge of frontier sedimentary basins and marginal plateaus, and allow assessment of their petroleum prospectivity and environmental significance. Four key areas were targeted: the Zeewyck and Houtman sub-basins (Perth Basin), the Cuvier margin (northwest of the Southern Carnarvon Basin), and the Cuvier Plateau (a sub-feature of the Wallaby Plateau). These areas were mapped using multi-beam sonar, shallow seismic, magnetics and gravity. Over the duration of the survey a total of 229,000 km2 (26,500 line-km) of seabed was mapped with the multibeam sonar, 25,000 line-km of digital shallow seismic reflection data and 25,000 line-km of gravity and magnetic data. Sampling sites covering a range of seabed features were identified from the preliminary analysis of the multi-beam bathymetry grids and pre-existing geophysical data (seismic and gravity). A variety of sampling equipment was deployed over the duration of the survey, including ocean floor observation systems (OFOS), deep-sea TV controlled grab (BODO), boxcores, rock dredges, conductivity-temperature depth profilers (CTD), and epibenthic sleds. Different combinations of equipment were used at each station depending on the morphology of the seabed and objectives of each site. A total of 62 stations were examined throughout the survey, including 16 over the Houtman Sub-basin, 16 over the Zeewyck Subbasin, 13 in the Cuvier margin, 12 over the Cuvier Plateau and four in the Indian Ocean. This dataset comprises total chlorin concentrations and chlorin indices measured on the upper 2 cm of seabed sediments. For more information: Daniell, J., Jorgensen, D.C., Anderson, T., Borissova, I., Burq, S., Heap, A.D., Hughes, M., Mantle, D., Nelson, G., Nichol, S., Nicholson, C., Payne, D., Przeslawski, R., Radke, L., Siwabessy, J., Smith, C., and Shipboard Party, (2010). Frontier Basins of the West Australian Continental Margin: Post-survey Report of Marine Reconnaissance and Geological Sampling Survey GA2476. Geoscience Australia, Record 2009/38, 229pp

Geoscience Australia marine reconnaissance survey GA2476 to the west Australian continental margin was undertaken as part of the Australian Government's Offshore Energy Program between 25 October 2008 and 19 January 2009 using the German research vessel RV Sonne. The survey acquired geological, geophysical, oceanographic and biological data over poorly known areas of Australia's western continental margin in order to improve knowledge of frontier sedimentary basins and marginal plateaus, and allow assessment of their petroleum prospectivity and environmental significance. Four key areas were targeted: the Zeewyck and Houtman sub-basins (Perth Basin), the Cuvier margin (northwest of the Southern Carnarvon Basin), and the Cuvier Plateau (a sub-feature of the Wallaby Plateau). These areas were mapped using multi-beam sonar, shallow seismic, magnetics and gravity. Over the duration of the survey a total of 229,000 km2 (26,500 line-km) of seabed was mapped with the multibeam sonar, 25,000 line-km of digital shallow seismic reflection data and 25,000 line-km of gravity and magnetic data. Sampling sites covering a range of seabed features were identified from the preliminary analysis of the multi-beam bathymetry grids and pre-existing geophysical data (seismic and gravity). A variety of sampling equipment was deployed over the duration of the survey, including ocean floor observation systems (OFOS), deep-sea TV controlled grab (BODO), boxcores, rock dredges, conductivity-temperature depth profilers (CTD), and epibenthic sleds. Different combinations of equipment were used at each station depending on the morphology of the seabed and objectives of each site. A total of 62 stations were examined throughout the survey, including 16 over the Houtman Sub-basin, 16 over the Zeewyck Subbasin, 13 in the Cuvier margin, 12 over the Cuvier Plateau and four in the Indian Ocean. This dataset comprises total chlorin concentrations and chlorin indices measured on the upper 2 cm of seabed sediments. For more information: Daniell, J., Jorgensen, D.C., Anderson, T., Borissova, I., Burq, S., Heap, A.D., Hughes, M., Mantle, D., Nelson, G., Nichol, S., Nicholson, C., Payne, D., Przeslawski, R., Radke, L., Siwabessy, J., Smith, C., and Shipboard Party, (2010). Frontier Basins of the West Australian Continental Margin: Post-survey Report of Marine Reconnaissance and Geological Sampling Survey GA2476. Geoscience Australia, Record 2009/38, 229pp

Geoscience Australia carried out marine surveys in Jervis Bay (NSW) in 2007, 2008 and 2009 (GA303, GA305, GA309, GA312) to map seabed bathymetry and characterise benthic environments through co-located sampling of surface sediments (for textural and biogeochemical analysis) and infauna, observation of benthic habitats using underwater towed video and stills photography, and measurement of ocean tides and wave-generated currents. Data and samples were acquired using the Defence Science & Technology Organisation (DSTO) Research Vessel Kimbla. Bathymetric mapping, sampling and tide/wave measurement were concentrated in a 3x5 km survey grid (named Darling Road Grid, DRG) within the southern part of the Jervis Bay, incorporating the bay entrance. Additional sampling and stills photography plus bathymetric mapping along transits was undertaken at representative habitat types outside the DRG. This 42 sample data set comprises the mineraology of surface seabed sediment (~0-2 cm) in Jervis Bay. More information: Radke, L.C., Huang, Z., Przeslawski, R., Webster, I.T., McArthur, M.A., Anderson, T.J., P.J. Siwabessy, Brooke, B. 2011. Including biogeochemical factors and a temporal component in benthic habitat maps: influences on infaunal diversity in a temperate embayment. Marine and Freshwater Research 62 (12): 1432 - 1448. Huang, Z., McArthur, M., Radke, L., Anderson, T., Nichol, S., Siwabessy, J. and Brooke, B. 2012. Developing physical surrogates for benthic biodiversity using co-located samples and regression tree models: a conceptual synthesis for a sandy temperature embayment. International Journal of Geographical Information Science DOI:10.1080/13658816.2012.658808.

Geoscience Australia carried out marine surveys in Jervis Bay (NSW) in 2007, 2008 and 2009 (GA303, GA305, GA309, GA312) to map seabed bathymetry and characterise benthic environments through co-located sampling of surface sediments (for textural and biogeochemical analysis) and infauna, observation of benthic habitats using underwater towed video and stills photography, and measurement of ocean tides and wave-generated currents. Data and samples were acquired using the Defence Science & Technology Organisation (DSTO) Research Vessel Kimbla. Bathymetric mapping, sampling and tide/wave measurement were concentrated in a 3x5 km survey grid (named Darling Road Grid, DRG) within the southern part of the Jervis Bay, incorporating the bay entrance. Additional sampling and stills photography plus bathymetric mapping along transits was undertaken at representative habitat types outside the DRG. This 128 sample data set comprises major, minor and trace elements derived from x-ray fluorescence analysis of surface seabed sediments (~0-2 cm). Sediment surface area data are also presented. More Information: Radke, L.C., Huang, Z., Przeslawski, R., Webster, I.T., McArthur, M.A., Anderson, T.J., P.J. Siwabessy, Brooke, B. 2011. Including biogeochemical factors and a temporal component in benthic habitat maps: influences on infaunal diversity in a temperate embayment. Marine and Freshwater Research 62 (12): 1432 - 1448. Huang, Z., McArthur, M., Radke, L., Anderson, T., Nichol, S., Siwabessy, J. and Brooke, B. 2012. Developing physical surrogates for benthic biodiversity using co-located samples and regression tree models: a conceptual synthesis for a sandy temperature embayment. International Journal of Geographical Information Science DOI:10.1080/13658816.2012.658808.