A growing need to manage marine biodiversity sustainably at local, regional and global scales cannot be met by applying the limited existing biological data. Abiotic surrogates of biodiversity are thus increasingly valuable in filling the gaps in our knowledge of biodiversity patterns, especially identification of hotspots, habitats needed by endangered or commercially valuable species and systems or processes important to the sustained provision of ecosystem services. This review examines the use of abiotic variables as surrogates for patterns in benthic assemblages with particular regard to how variables are tied to processes affecting biodiversity and how easily those variables can be measured at scales relevant to resource management decisions.

Physical and biological characteristics of benthic communities are analysed from underwater video footage collected across the George V Shelf during the 2007/2008 CEAMARC voyage. Benthic habitats are strongly structured by physical processes operating over a range of temporal and spatial scales. Iceberg scouring recurs over timescales of years to centuries along shallower parts of the shelf, creating communities in various stages of maturity and recolonisation. Upwelling of modified circumpolar deep water (MCDW) onto the outer shelf, and cross-shelf flow of high salinity shelf water (HSSW) create spatial contrasts in nutrient and sediment supply, which are largely reflected in the distribution of deposit and filter feeding communities. Long term cycles in the advance and retreat of icesheets (over millennial scales) and subsequent focussing of sediments in troughs such as the Mertz Drift create patches of consolidated and soft sediments, which also provide distinct habitats for colonisation by different biota. These physical processes of iceberg scouring, current regimes and depositional environments, in addition to water depth, are shown to be important factors in the structure of benthic communities across the George V Shelf. The modern shelf communities mapped in this study largely represent colonisation over the past 8-12ka, following retreat of the icesheet and glaciers at the end of the last glaciation (Harris et al., 2001; Ingólfsson et al., 1998). Recolonisation on this shelf may have occurred from two sources: deep-sea environments, and possible shelf refugia on the Mertz and Adélie Banks. However, any open shelf area would have been subject to intense iceberg scouring (Beaman and Harris, 2003). Understanding the timescales over which shelf communities have evolved and the physical factors which shape them, will allow better prediction of the distribution of Antarctic shelf communities and their vulnerability to change. This knowledge can aid better management regimes for the Antarctic margin.

In 2007-08 scientists from Australia, Japan and France set out to survey the marine life and habitats in the region adjacent to Terre Adelie and George V Land in East Antarctica (Australian Antarctic Magazine 14: 2-13, 2008). The Collaborative East Antarctic Marine Census (CEAMARC) - part of Australia's contribution to the International Polar Year - aimed to understand the processes that have lead to the evolution and survival of marine life existing in the region today, so that scientists can predict how these organisms may respond to future climate-related changes in their environment. Scientists involved in the census are now finalising the collation and analysis of data and the following pages (13-18) provide an insight into some of the results. The team aims to publish its findings as a series of papers in a special volume of a scientific journal in late 2010.

Geoscience Australia carried out marine surveys in Jervis Bay (NSW) in 2007, 2008 and 2009 (GA303, GA305, GA309, GA312) to map seabed bathymetry and characterise benthic environments through co-located sampling of surface sediments (for textural and biogeochemical analysis) and infauna, observation of benthic habitats using underwater towed video and stills photography, and measurement of ocean tides and wave-generated currents. Data and samples were acquired using the Defence Science and Technology Organisation (DSTO) Research Vessel Kimbla. Bathymetric mapping, sampling and tide/wave measurement were concentrated in a 3x5 km survey grid (named Darling Road Grid, DRG) within the southern part of the Jervis Bay, incorporating the bay entrance. Additional sampling and stills photography plus bathymetric mapping along transits was undertaken at representative habitat types outside the DRG. This 128 sample data set comprises major, minor and trace elements derived from x-ray fluorescence analysis of surface seabed sediments (~0-2 cm). Sediment surface area data are also presented.

Geoscience Australia carried out a marine survey on Lord Howe Island shelf (NSW) in 2008 (SS06-2008) to map seabed bathymetry and characterise benthic environments through co-located sampling of surface sediments and infauna, rock coring, observation of benthic habitats using underwater towed video, and measurement of ocean tides and wave-generated currents. Sub-bottom profile data was also collected to map sediment thickness and shelf stratigraphy. Data and samples were acquired using the National Facility Research Vessel Southern Surveyor. Bathymetric data from this survey was merged with other pre-existing bathymetric data (including LADS) to generate a grid covering 1034 sq km. As part of a separate Geoscience Australia survey in 2007 (TAN0713), an oceanographic mooring was deployed on the northern edge of Lord Howe Island shelf. The mooring was recovered during the 2008 survey following a 6 month deployment. Seabed sediment samples were collected by a Smith McIntyre grab at a total of 36 locations (see Brooke et al. 2010). The full sample set represents 16 sampling stations, with multiple (2 or 3) samples taken at 10 of these stations.

Geoscience Australia carried out marine surveys in south-east Tasmania in 2008 and 2009 (GA0315) to map seabed bathymetry and characterise benthic environments through observation of habitats using underwater towed video. Data was acquired using the Tasmania Aquaculture and Fisheries Institute (TAFI) Research Vessel Challenger. Bathymetric mapping was undertaken in seven survey areas, including: Freycinet Pensinula (83 sq km, east coast and shelf); Tasman Peninsula (117 sq km, east coast and shelf); Port Arthur and adjacent open coast (17 sq km); The Friars (41 sq km, south of Bruny Island); lower Huon River estuary (39 sq km); D Entrecastreaux Channel (7 sq km, at Tinderbox north of Bruny Island), and; Maria Island (3 sq km, western side). Video characterisations of the seabed concentrated on areas of bedrock reef and adjacent seabed in all mapped areas, except for D Entrecastreaux Channel and Maria Island. Seabed sediment samples were collected by TAFI in August 2010 in a targeted area to the east of Tasman Peninsula. Samples were collected at 25 stations using a Van Veen grab, from which a 50 - 100 g sub-sample was taken and submitted to Geoscience Australia for analysis.

Geoscience Australia carried out a marine survey on Lord Howe Island shelf (NSW) in 2008 (SS062008) to map seabed bathymetry and characterise benthic environments through colocated sampling of surface sediments and infauna, rock coring, observation of benthic habitats using underwater towed video, and measurement of ocean tides and wavegenerated currents. Subbottom profile data was also collected to map sediment thickness and shelf stratigraphy. Data and samples were acquired using the National Facility Research Vessel Southern Surveyor. Bathymetric data from this survey was merged with other preexisting bathymetric data (including LADS) to generate a grid covering 1034 sq km. As part of a separate Geoscience Australia survey in 2007 (TAN0713), an oceanographic mooring was deployed on the northern edge of Lord Howe Island shelf. The mooring was recovered during the 2008 survey following a 6 month deployment. lh_4m is an ArcInfo grid of the Lord Howe survey area produced from the processed EM300 bathymetry data of the survey area using the CARIS HIPS and SIPS software.

Understanding and predicting the bio-physical relationships between seabed habitats, biological assemblages, and marine biodiversity is critical to managing marine systems. Species distributions and assemblage structure of infauna were examined on the oceanic shelf surrounding Lord Howe Island (LHI) relative to seabed complexity within and adjacent to a newly discovered relict coral reef. High resolution multibeam sonar was used to map the shelf, and identified an extensive relict reef in the middle of the shelf, which separated an inner drowned lagoon from the outer shelf. Shelf sediments and infauna were sampled using a Smith McIntyre grab. The three geomorphic zones (drowned lagoon, relict reef and outer shelf) were strong predictors or surrogates of the physical structure and sediment composition of the LHI shelf and its infaunal assemblage. Infaunal assemblages were highly diverse with many new and endemic species recorded. Each zone supported characteristic assemblages and feeding guilds, with higher abundance and diversity offshore.

The overarching theme of this book (and for the GeoHab organisation in general) is that mapping seafloor geomorphic features is useful for understanding benthic habitats. Many of the case studies in this volume demonstrate that geomorphic feature type is a powerful surrogate for associated benthic communities. Here we provide a brief overview of the major geomorphic features that are described in the detailed case studies (which follow in Part II of this book). Starting from the coast we will consider sandy temperate coasts, rocky temperate coasts, estuaries and fjords, barrier islands and glaciated coasts. Moving offshore onto the continental shelf we will consider sandbanks, sandwaves, rocky ridges, shallow banks, coral reefs, shelf valleys and other shelf habitats. Finally, on the continental slope and deep ocean environments we will review the general geomorphology and associated habitats of escarpments, submarine canyons, seamounts, plateaus and deep sea vent communities.

A range of physical descriptors of the seabed can potentially be used as surrogates for defining patterns of benthic marine biodiversity, including bathymetry, geomorphology and sediment type. These variables can be mapped, described and sampled across spatial scales that are of value to the management of the marine estate by providing a template for monitoring benthic ecosystems. As part of a four-year program (2007-2010) funded by the Australian Government, Geoscience Australia led marine surveys designed to collect robust datasets for the analysis of surrogacy relationships between a suite of physical variables and benthic biota in select areas of the Australian continental shelf. This paper focuses on results of the 2008 Carnarvon shelf survey, located within a Commonwealth Marine Park and adjacent to the World Heritage-listed Ningaloo Reef (Western Australia). High resolution multibeam sonar mapping, underwater video and benthic sampling revealed a complex geomorphology of ridges, mounds and sandy bedforms. The largest ridge extends 15 km alongshore is 20 m high and interpreted as a drowned forereef. Smaller ridges are ~1 km long, oriented northeast and preserve the form of aeolian dunes. Mounds are up to 5 m high and form extensive fields surrounded by flat sandy seabed. These ridges and mounds provide hardground habitat for diverse coral and sponge communities, whereas the surrounding sandy seafloor is characterised by few sessile benthic organisms. Multivariate analysis of these relationships is used to develop predictive models of benthic habitats, demonstrating the utility of high resolution physical data for informing management of these ecosystems.