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Find a rock or a rock nearby using Convolution Neural Networks

<div><strong>Output Type: </strong>Exploring for the Future Extended Abstract</div><div><br></div><div><strong>Short Abstract: </strong>Most geological mapping either over-estimates the amount of bedrock exposed at the surface or can miss local bedrock exposures in geological units describing cover materials (i.e. alluvium and colluvium). A machine learning, Convolutional Neural Network (CNN) has been applied to detect outcrops (exposed bedrock at the earth’s surface) and areas of very shallow cover over bedrock (i.e. sub-crop) at one meter resolution. We used a multi-feature training dataset consisting of sites associated with urban areas, roads, outcrops, waterbodies, soil (includes bare soil and soil covered by green and dry vegetation), trees, and shadows. Even though we were only interested in mapping outcrop, a multi-criteria label set significantly improved overall accuracy of the model. The explanatory variables or covariates included high-resolution satellite imagery, Sentinel-2 imagery, and terrain derivatives. The modelling approach was tested over an area in central West NSW, Australia. Labels were split into 80% for training and 20% for out-of-sample validation. Spatial K-groups were used in the training set to minimize auto-spatial correlation between neighbouring points and reduce the potential for overfitting. Two CNN model architectures were evaluated: Simple-Net and UNet. The Simple-Net structure consists of 2D Convolution layer and flatten layer, whereas the UNet architecture includes a mixture of 2D convolution layer, max pooling, up sampling and flatten layer. These models were tested with and without the use of high-resolution imagery. The UNet model incorporating high resolution imagery gave the best results (accuracy of 0.841 and an F1 score of 0.814), compared with Simple-Net (accuracy of 0.823 and an F1 score of 0.786). However, the Simple-Net’s model without the incorporation of high-resolution imagery was a slight improvement over the UNet architecture and due to the lack of national coverage for high-resolution imagery, the Simple-Net model offers better scalability. The detection of outcrop/sub-crop has broad application in improving the spatial explicitness of existing geological maps, improving sample detection and interpretation of litho-stratigraphy and geochemistry. High spatial resolution of outcrop/sub-crop also has implications in the agricultural and civil engineering sectors, ecology and in understanding surface and near-surface hydrological systems. After this proof-of-concept phase we plan to up-scale the approach nationally using a more representative labels and national covariates.</div><div><br></div><div><strong>Citation: </strong>Du, Z., Wilford, J. &amp; Roberts, D., 2024. Find a rock or a rock nearby using Convolution Neural Networks. In: Czarnota, K. (ed.) Exploring for the Future: Extended Abstracts. Geoscience Australia, Canberra. https://doi.org/10.26186/149631</div>

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Identification info

Date (Creation)
2024-05-22T22:00:00
Date (Publication)
2024-08-11T22:56:48
Citation identifier
Geoscience Australia Persistent Identifier/https://pid.geoscience.gov.au/dataset/ga/149631

Citation identifier
Digital Object Identifier/https://dx.doi.org/10.26186/149631

Cited responsible party
Role Organisation / Individual Name Details
Publisher

Commonwealth of Australia (Geoscience Australia)

Voice
Author

Du, Z.

Internal Contact
Author

Wilford, J.

Internal Contact
Author

Roberts, D.

External Contact
Editor

Czarnota, K.

Internal Contact
Purpose

Purpose 1. Making geological maps more spatially explicit and accurate. 2. Targeting rock exposes for geological interpretation and sampling (e.g. geochemistry)3. Improving our understanding of surface and near-surface hydrology4. Improve agricultural assessment associated with surface fertility, drainage, and land suitability classification.5. Ecological modelling – identifying flora and fauna habitat and refuge. 6. Inputs into civil engineering planning – road construction, quarrying and excavation.

Status
Completed
Point of contact
Role Organisation / Individual Name Details
Resource provider

Minerals, Energy and Groundwater Division

External Contact
Point of contact

Commonwealth of Australia (Geoscience Australia)

Voice
Point of contact

Du, Z.

MEG Internal Contact
Spatial representation type
Topic category
  • Geoscientific information

Extent

N
S
E
W


Maintenance and update frequency
Not planned

Resource format

Title

Product data repository: Various Formats

Website

Data Store directory containing the digital product files

Data Store directory containing one or more files, possibly in a variety of formats, accessible to Geoscience Australia staff only for internal purposes

Project
  • EFTF – Exploring for the Future

Project
  • Australia’s Resources Framework

Keywords
  • geological mapping

Keywords
  • machine learning

Keywords
  • outcrop

theme.ANZRC Fields of Research.rdf
  • Geomorphology and earth surface processes

Keywords
  • Published_External

Resource constraints

Title

Creative Commons Attribution 4.0 International Licence

Alternate title

CC-BY

Edition

4.0

Website

https://creativecommons.org/licenses/by/4.0/

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Role Organisation / Individual Name Details
User

Any

Use constraints
License
Use constraints
Other restrictions
Other constraints

© Commonwealth of Australia (Geoscience Australia) 2024

Resource constraints

Title

Australian Government Security Classification System

Edition date
2018-11-01T00:00:00
Website

https://www.protectivesecurity.gov.au/Pages/default.aspx

Classification
Unclassified
Classification system

Australian Government Security Classification System

Language
English
Character encoding
UTF8

Distribution Information

Distributor contact
Role Organisation / Individual Name Details
Distributor

Commonwealth of Australia (Geoscience Australia)

Voice facsimile
OnLine resource

Extended Abstract for download (pdf) [2.2 MB]

Extended Abstract for download (pdf) [2.2 MB]

Distribution format
  • pdf

    File decompression technique

    nil

Resource lineage

Statement

<div>This work is based on a machine learning (ML) workflow using Convolution Neural Networks (CNNs) to generate high resolution outcrop predictions. The ML workflow uses 'Landshark' which is a python workflow to streamline CNN processing for large models. Landshark which was developed through a collaborative between Geoscience Australia and CSIRO. Landshark uses the TensorFlow platform (Abadi et al., 2016).</div><div><br></div><div>ABADI, M., et al. TensorFlow: a system for Large-Scale machine learning.&nbsp;12th USENIX symposium on operating systems design and implementation (OSDI 16), 2016. 265-283.</div><div><br></div><div>Using ML to detect rocky outcrops has tried previously. Similar work was undertaken by Petliak et al. (2019) where a CNN approach was used to separate exposed bare rock from soil or regolith. In this study we have used a combination of high resolution (1m) 3-band imagery together with a customized set of covariates including derivatives from a 30m terrain model and temporal-spectral covariates generated from time series and bare earth (Roberts et al. 2019) Sentinel-2 satellite observations. The CNN model was trained on seven key surface features including urban areas, roads, outcrops, waterbodies, soil (includes bare soil and soil covered by green and dry vegetation), trees, and shadows. We select 1000+ sample for each class. We used 80% of the sites for training and 20% for out-of-sample. Results are found in the extended abstract.</div><div><br></div><div>Petliak, H.; Cerovski-Darriau, C.; Zaliva, V.; Stock, J. Where’s the Rock: Using Convolutional Neural Networks to Improve Land Cover Classification.&nbsp;<em>Remote Sens.</em>&nbsp;<strong>2019</strong>,&nbsp;<em>11</em>, 2211.&nbsp;</div><div><br></div><div>Roberts D., Wilford J. & Ghattas O., 2019. Exposed soil and mineral map of the Australian continent revealing the land at its barest. <em>Nature Communications </em>10:5297</div><div><br></div><div><br></div>

Metadata constraints

Title

Australian Government Security Classification System

Edition date
2018-11-01T00:00:00
Website

https://www.protectivesecurity.gov.au/Pages/default.aspx

Classification
Unclassified

Metadata

Metadata identifier
urn:uuid/4f5c31b1-4983-43d5-8ef3-c8563ec8ad73

Title

GeoNetwork UUID

Language
English
Character encoding
UTF8
Contact
Role Organisation / Individual Name Details
Point of contact

Commonwealth of Australia (Geoscience Australia)

Voice
Point of contact

Du, Z.

MEG Internal Contact

Type of resource

Resource scope
Document
Name

GA Abstract / Fact Sheet

Alternative metadata reference

Title

Geoscience Australia - short identifier for metadata record with

uuid

Citation identifier
eCatId/149631

Metadata linkage

https://ecat.ga.gov.au/geonetwork/srv/eng/catalog.search#/metadata/4f5c31b1-4983-43d5-8ef3-c8563ec8ad73

Date info (Creation)
2024-08-06T23:36:38
Date info (Revision)
2024-08-06T23:36:38

Metadata standard

Title

AU/NZS ISO 19115-1:2014

Metadata standard

Title

ISO 19115-1:2014

Metadata standard

Title

ISO 19115-3

Title

Geoscience Australia Community Metadata Profile of ISO 19115-1:2014

Edition

Version 2.0, September 2018

Citation identifier
http://pid.geoscience.gov.au/dataset/ga/122551

 
 

Spatial extent

N
S
E
W


Keywords

Australia’s Resources Framework EFTF – Exploring for the Future
theme.ANZRC Fields of Research.rdf
Geomorphology and earth surface processes

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